HCLS Agents Catalog
HCLS Agents Catalog
Healthcare & Life Sciences Toolkit

Healthcare & Life Sciences Agents

A comprehensive catalog of 35 AI-powered agents built on Amazon Bedrock, spanning clinical operations, genomics, drug development, and more.

Total Agents
35
Categories
8
AWS Services
15+
3rd Party APIs
25+
Strands SDK
12
Filter by Category
📋 All (35)
🏥 Clinical & Healthcare Ops (9)
🧬 Genomics & Proteomics (6)
💊 Drug Development & Safety (5)
📚 Research & Literature (5)
🔬 Medical Imaging & Analysis (3)
📈 Statistical & Scheduling (2)
🤖 Lab Automation & Integration (4)
🏷️ Terminology & IP (2)
Showing 35 of 35 agents
# Agent Name Category Key Capability AWS Services Integrations
01
Biomarker Database Analyst
NL-to-SQL on clinical + RNA-seq data from Redshift
Genomics NL-to-SQL on clinical + RNA-seq data from Redshift BedrockRedshiftLambda NSCLC RadiogenomicsSQL databases
Use Cases
Analyze structured clinical and RNA-seq data
Convert natural language to SQL queries
Query biomarker databases
AWS Services
Amazon BedrockAmazon RedshiftAWS Lambda
Third-Party Tools
NSCLC RadiogenomicsSQL databases
02
Clinical Evidence Researcher
PubMed search + RAG literature summarization
Clinical PubMed search + RAG literature summarization BedrockBedrock Knowledge BasesLambda PubMed APIScientific literature DBs
Use Cases
Search PubMed for biomedical literature
Retrieve internal literature evidence
Summarize scientific insights
AWS Services
Amazon BedrockBedrock Knowledge BasesAWS Lambda
Third-Party Tools
PubMed APIScientific literature DBs
03
Medical Imaging Expert
CT scan processing + tumor segmentation via SageMaker
Medical Imaging CT scan processing + tumor segmentation via SageMaker BedrockSageMakerS3+1 NSCLC RadiogenomicsCT scan imaging data
Use Cases
Process CT scan images
Trigger asynchronous imaging jobs
Analyze tumor features and segmentation
AWS Services
Amazon BedrockAmazon SageMakerAmazon S3AWS Lambda
Third-Party Tools
NSCLC RadiogenomicsCT scan imaging data
04
Statistician
Survival regression, Kaplan-Meier, descriptive plots
Statistical Survival regression, Kaplan-Meier, descriptive plots BedrockLambda Python lifelinesStatistical analysis t...
Use Cases
Perform survival regression analysis
Create Kaplan-Meier plots
Generate descriptive statistics charts
AWS Services
Amazon BedrockAWS Lambda
Third-Party Tools
Python lifelinesStatistical analysis tools
05
Biological Pathways Analyst
Text-to-Cypher on Reactome pathway database in Neptune
Genomics Text-to-Cypher on Reactome pathway database in Neptune BedrockNeptuneLambda+1 Reactome databaseOpenCypher
Use Cases
Query Reactome pathway database
Analyze protein interactions
Explore disease mechanisms
AWS Services
Amazon BedrockAmazon NeptuneAWS LambdaAmazon S3
Third-Party Tools
Reactome databaseOpenCypher
06
Omics Signatures Enrichment
Enrich omics metadata via graph queries on Reactome
Genomics Enrich omics metadata via graph queries on Reactome BedrockNeptuneLambda+1 Reactome databaseBiomedical ontologies
Use Cases
Map gene/protein metadata
Retrieve external database identifiers
Enrich omics data with ontologies
AWS Services
Amazon BedrockAmazon NeptuneAWS LambdaAmazon S3
Third-Party Tools
Reactome databaseBiomedical ontologies
07
Pathology Agent
WSI feature extraction + MIL classifier for MSI status
Medical Imaging WSI feature extraction + MIL classifier for MSI status BedrockBatchS3+2 TCGA-COAD datasetHOptimus0 model+1
Use Cases
Retrieve and parse pathology reports
Extract MSI status from reports
Run ML-based biomarker classification
AWS Services
Amazon BedrockAWS BatchAmazon S3AWS CodeBuildAmazon ECR
Third-Party Tools
TCGA-COAD datasetHOptimus0 modelTrident framework
08
Protein Design Agent
Directed evolution protein optimization via HealthOmics
Genomics Directed evolution protein optimization via HealthOmics BedrockHealthOmicsLambda+2 EvoProtGrad libraryESM-2 protein language...
Use Cases
Optimize protein sequences
Monitor workflow progress
Analyze optimization results
AWS Services
Amazon BedrockAWS HealthOmicsAWS LambdaAmazon S3Amazon ECR
Third-Party Tools
EvoProtGrad libraryESM-2 protein language model
09
Radiology Report Agent
Validate radiology reports against ACR guidelines
Clinical Validate radiology reports against ACR guidelines BedrockLambdaS3+1 ACR validation documentsRadiology reporting st...
Use Cases
Validate radiology reports against ACR guidelines
Identify missing anatomical structures
Provide actionable feedback
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
ACR validation documentsRadiology reporting standards
10
SEC Form 10-K Agent
Analyze financial disclosures from SEC EDGAR
Research Analyze financial disclosures from SEC EDGAR BedrockLambdaS3+1 SEC EDGAR APIUS-GAAP taxonomy
Use Cases
Analyze company financial data
Retrieve SEC EDGAR disclosures
Generate financial insights
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
SEC EDGAR APIUS-GAAP taxonomy
11
Tavily Web Search Agent
Internet search with cited, factual responses
Research Internet search with cited, factual responses BedrockLambdaS3+1 Tavily Search API
Use Cases
Execute internet searches
Retrieve authoritative sources
Provide cited responses
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
Tavily Search API
12
JSL Analyze Medical Reports
Extract SDOH, map ICD-10-CM codes from clinical text
Clinical Extract SDOH, map ICD-10-CM codes from clinical text BedrockSageMakerLambda+1 John Snow Labs medical...ICD-10-CM codes+1
Use Cases
Extract social determinants of health
Map ICD-10-CM codes
Analyze clinical text
AWS Services
Amazon BedrockAmazon SageMakerAWS LambdaIAM
Third-Party Tools
John Snow Labs medical LLMsICD-10-CM codesAWS Marketplace
13
JSL Medical Reasoning
Clinical decision support using JSL 14B reasoning model
Drug Development Clinical decision support using JSL 14B reasoning model BedrockSageMakerLambda+1 John Snow Labs Medical...AWS Marketplace
Use Cases
Provide clinical decision support
Analyze complex patient cases
Generate evidence-based recommendations
AWS Services
Amazon BedrockAmazon SageMakerAWS LambdaIAM
Third-Party Tools
John Snow Labs Medical Reasoning LLMAWS Marketplace
14
USPTO Search
Search USPTO patent database, explain in plain language
Terminology Search USPTO patent database, explain in plain language BedrockLambdaS3+1 USPTO Open Data Portal...
Use Cases
Search USPTO patent database
Retrieve patent information
Explain technical concepts
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
USPTO Open Data Portal API
15
Clinical Study Research Agent
Explore & visualize clinical trial data
Clinical Explore & visualize clinical trial data BedrockLambdaS3+1 ClinicalTrials.gov APIDrug databases
Use Cases
Search clinical trials
Visualize trial data
Retrieve drug information
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
ClinicalTrials.gov APIDrug databases
16
Clinical Trial Protocol Generator
Generate & optimize clinical trial protocols
Clinical Generate & optimize clinical trial protocols BedrockLambdaS3+1 Clinical trial best pr...Common data models
Use Cases
Generate protocol templates
Review protocol completeness
Recommend endpoints and sample sizes
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
Clinical trial best practicesCommon data models
17
Variant Interpreter Agent
VCF processing + VEP annotation + NL variant queries
Genomics VCF processing + VEP annotation + NL variant queries BedrockHealthOmicsDynamoDB+6 VEP1000 Genomes+2
Use Cases
Process VCF files with VEP annotation
Query genomic data with natural language
Perform variant interpretation
AWS Services
Amazon BedrockAWS HealthOmicsAmazon DynamoDBAWS LambdaAmazon AthenaAWS GlueAWS Lake FormationAmazon S3Amazon ECR
Third-Party Tools
VEP1000 GenomesClinVarStreamlit
18
Wiley OA Life Sciences Agent
Search Wiley OA articles with DOI citations
Research Search Wiley OA articles with DOI citations BedrockLambdaS3+1 Wiley Online LibraryOA Life Sciences articles
Use Cases
Search Wiley scientific articles
Retrieve article excerpts
Provide cited responses
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
Wiley Online LibraryOA Life Sciences articles
19
UniProt Protein Search Agent
Search protein function, structure, disease associations
Genomics Search protein function, structure, disease associations BedrockLambdaS3+1 UniProt REST APIProtein databases
Use Cases
Search UniProt protein database
Retrieve protein details
Analyze protein function and structure
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
UniProt REST APIProtein databases
20
Single Cell QC Agent
Validate scRNA-seq quality from Cell Ranger summaries
Medical Imaging Validate scRNA-seq quality from Cell Ranger summaries BedrockLambdaS3+1 10x Genomics Cell RangerSingle cell RNA-seq data
Use Cases
Analyze Cell Ranger web summaries
Validate QC metrics
Identify quality issues
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
10x Genomics Cell RangerSingle cell RNA-seq data
21
In Vivo Study Scheduler
Constraint-based schedule optimization with OR-Tools
Statistical Constraint-based schedule optimization with OR-Tools BedrockLambda (container)ECR+1 OR-ToolsPuLP+1
Use Cases
Optimize study schedules
Balance resource utilization
Recommend alternative sites
AWS Services
Amazon BedrockAWS Lambda (container)Amazon ECRIAM
Third-Party Tools
OR-ToolsPuLPPyomo
22
Safety Signal Detection Agent
Detect adverse event signals from OpenFDA + PubMed
Drug Development Detect adverse event signals from OpenFDA + PubMed BedrockLambdaS3+1 OpenFDA APIPubMed API+1
Use Cases
Analyze adverse event data
Detect safety signals
Assess evidence from literature
AWS Services
Amazon BedrockAWS LambdaAmazon S3IAM
Third-Party Tools
OpenFDA APIPubMed APIFDA label data
23
Data Harmonization Drug Dev
Standardize pipeline data with 8+ ontologies
Drug Development Standardize pipeline data with 8+ ontologies BedrockOpenSearch ServerlessS3+1 MONDOChEBI+6
Use Cases
Harmonize pipeline data
Standardize with ontologies
Answer pipeline questions
AWS Services
Amazon BedrockAmazon OpenSearch ServerlessAmazon S3IAM
Third-Party Tools
MONDOChEBIEFONCITMeSHATCICD-10SNOMED CT
24
Deep Research Agent
Autonomous multi-agent literature surveys via AgentCore
Research Autonomous multi-agent literature surveys via AgentCore Bedrock AgentCoreLambdaDynamoDB+3 PubMed Central APIStrands Agents SDK+1
Use Cases
Conduct autonomous literature surveys
Search PubMed Central
Generate comprehensive research reports
AWS Services
Amazon Bedrock AgentCoreAWS LambdaAmazon DynamoDBAmazon S3AWS CodeBuildAmazon ECR
Third-Party Tools
PubMed Central APIStrands Agents SDKMulti-agent orchestration
25
DMTA Orchestration Agent
Design-Make-Test-Analyze cycles with active learning
Lab Automation Design-Make-Test-Analyze cycles with active learning BedrockLambdaDynamoDB+2 Opentrons OT-2 APIGaussian Process modeling+1
Use Cases
Plan DMTA projects
Design protein variants
Execute automated experiments
Analyze results with GP modeling
AWS Services
Amazon BedrockAWS LambdaAmazon DynamoDBAmazon S3IAM
Third-Party Tools
Opentrons OT-2 APIGaussian Process modelingActive learning
26
Medical Device Agent
Device monitoring + PubMed + clinical trials lookup
Clinical Device monitoring + PubMed + clinical trials lookup BedrockECS FargateALB+3 PubMed (NCBI eUtils)ClinicalTrials.gov+3
Use Cases
Monitor device status
Search medical literature
Find clinical trials
AWS Services
Amazon BedrockAmazon ECS FargateALBAmazon VPCAmazon ECRCloudWatch
Third-Party Tools
PubMed (NCBI eUtils)ClinicalTrials.govStrands SDKStreamlitSQLite
27
Enrollment Pulse Agent
Enrollment analytics from Veeva CTMS data
Clinical Enrollment analytics from Veeva CTMS data BedrockLambdaLambda Function URLs+1 Veeva CTMS dataFastAPI+2
Use Cases
Analyze clinical trial enrollment
Provide site-specific insights
Recommend interventions
AWS Services
Amazon BedrockAWS LambdaLambda Function URLsIAM
Third-Party Tools
Veeva CTMS dataFastAPIStrands Agent SDKPandas
28
Research Agent with Biomni
Multi-tool biomedical research via AgentCore
Research Multi-tool biomedical research via AgentCore Bedrock AgentCoreCognitoLambda+2 Biomni database toolsPubMed API+2
Use Cases
Access Biomni database tools
Search PubMed
Query knowledge bases
AWS Services
Amazon Bedrock AgentCoreAmazon CognitoAWS LambdaAmazon S3IAM
Third-Party Tools
Biomni database toolsPubMed APIStrands frameworkStreamlit
29
Clinical Prior Auth
Automate prior authorization from FHIR patient data
Clinical Automate prior authorization from FHIR patient data BedrockTitan Text Express FHIR data formatHealthcare billing guides+2
Use Cases
Analyze patient FHIR data
Retrieve billing guides
Calculate claim costs
Determine approval status
AWS Services
Amazon BedrockAmazon Titan Text Express
Third-Party Tools
FHIR data formatHealthcare billing guidesFee schedulesStrands SDK
30
Clinical PreVisit Questionnaire
Conversational AI for health form completion
Drug Development Conversational AI for health form completion BedrockClaude 3.5 SonnetClaude 3 Haiku Strands Agents SDKReportLab PDF+1
Use Cases
Complete health questionnaires
Validate patient data
Generate PDF forms
AWS Services
Amazon BedrockClaude 3.5 SonnetClaude 3 Haiku
Third-Party Tools
Strands Agents SDKReportLab PDFPydantic
31
Drug Label Automated Reasoning
Defend against RAG poisoning on drug label info
Drug Development Defend against RAG poisoning on drug label info BedrockBedrock Automated ReasoningLambda+2 StreamlitDrug label data
Use Cases
Defend against RAG poisoning
Validate drug information
Ensure policy compliance
AWS Services
Amazon BedrockBedrock Automated ReasoningAWS LambdaAmazon S3CloudFormation
Third-Party Tools
StreamlitDrug label data
32
IDP Agent for Handwritten Docs
Extract structured data from handwritten forms via BDA
Lab Automation Extract structured data from handwritten forms via BDA Bedrock AgentCoreBedrock Data AutomationS3+2 Strands Agent SDKModel Context Protocol...+1
Use Cases
Extract structured data from handwritten forms
Enable natural language queries
Provide confidence scores
AWS Services
Amazon Bedrock AgentCoreBedrock Data AutomationAmazon S3Amazon ECRAWS CodeBuild
Third-Party Tools
Strands Agent SDKModel Context Protocol (MCP)Streamlit
33
Marketplace Agent Integration
Deploy & integrate marketplace agents via MCP
Lab Automation Deploy & integrate marketplace agents via MCP Bedrock AgentCoreMarketplaceIAM Tavily MCP serverModel Context Protocol...
Use Cases
Deploy marketplace agents
Integrate via MCP
Connect with local agents
AWS Services
Amazon Bedrock AgentCoreAWS MarketplaceIAM
Third-Party Tools
Tavily MCP serverModel Context Protocol (MCP)
34
SiLA2 Lab Automation Agent
AI-controlled SiLA2 lab devices via AgentCore
Lab Automation AI-controlled SiLA2 lab devices via AgentCore Bedrock AgentCoreECS FargateLambda+5 SiLA2 protocolMCP+3
Use Cases
Control SiLA2-compliant devices
Monitor device status
Analyze experimental data
Make intelligent control decisions
AWS Services
Amazon Bedrock AgentCoreAmazon ECS FargateAWS LambdaAmazon VPCAmazon ECRAmazon EventBridgeAmazon SNSCloudFormation
Third-Party Tools
SiLA2 protocolMCPOpentrons APIStreamlitgRPC
35
Terminology Agent
Standardize terms across 200+ ontologies via EBI OLS
Terminology Standardize terms across 200+ ontologies via EBI OLS Bedrock AgentCoreCognitoLambda+3 EBI OLSMONDO+7
Use Cases
Standardize medical terminology
Search 200+ ontologies
Extract medical entities
Map cross-domain terminology
AWS Services
Amazon Bedrock AgentCoreAmazon CognitoAWS LambdaAmazon S3AWS CDKCloudFront
Third-Party Tools
EBI OLSMONDOChEBIHPOGOMedDRASNOMED CTICD-10/11Strands SDK

AWS Service Adoption

Number of agents using each AWS service

Created with Highcharts 12.4.0Number of Agents2929272723231818886633333322222222222211111111111111111111111111111111111111111102468101214161820222426283032Amazon BedrockAmazon S3Amazon ECRAmazon SageMakerAmazon DynamoDBAWS HealthOmicsAmazon VPCCloudFormationBedrock Knowledge BasesAmazon AthenaAWS Lake FormationAmazon OpenSearch ServerlessCloudWatchAmazon Titan Text ExpressClaude 3 HaikuBedrock Data AutomationAmazon EventBridgeAWS CDK

Category Distribution

Agents per category

Created with Highcharts 12.4.0Clinical & Healthcare Ops: 9Genomics & Proteomics: 6Drug Development & Safety: 5Research & Literature: 5Medical Imaging & Analysis: 3Statistical & Scheduling: 2Lab Automation &Integration: 4Terminology & IP: 2

Top Third-Party Integrations

Most commonly used external tools & APIs

Created with Highcharts 12.4.066333322222222222222222201234567StreamlitPubMedStrands SDKNSCLC RadiogenomicsReactomebaseAWS MarketplaceClinicalTrials.govMONDOChEBISNOMED CTStrands Agents SDKStrands Agent SDK